Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886088.1_cds_XP_016440207.1_35686
CDS Infomation

[gene=LOC107766007] [db_xref=GeneID:107766007] [protein=zinc phosphodiesterase ELAC protein 2-like isoform X4] [protein_id=XP_016440207.1] [location=join(6549..6569,6676..7170,7247..7515,7627..7774,7892..7930,8131..8534,8628..9264,9892..10197)] [gbkey=CDS]
Sequence

ATGGGAGAAGAAGGAATGTCTGTCAATTTATGGGGTCCTTCTGATCTCAAGTACTTGGTC
GATGCAATGAAATCATTCATCCCAAATGCCGCCATGGTCCATGCACGGAGTTTTGGCCCA
ACTGTTGGATCAGTTGATGTTAGTACTGCTTCTTCAGGGACGAGTGATGATCTCTATGTT
CCTATTAACGATGAGGTTGTCAAAATATCTGCTGTTCTGTTGCGACCACGTTACTCAAAA
GTGTCTGACACAACAAAGGAAGGATCCTCTGAGCTGGATGATCCTCTAGTTGGTGTCAAT
CATTTGGCAGAGAACCTTTTAGTGCGGAGGATGCATTCCACAGCTGAATTTGCATTAAAG
CCTGGGGATCTTTCTGTGGTTTATATTTGTGAGTTGCCTGAAATTAAGGGAAAATTTGAC
CCCAAAAAGGCTGCTGCTCTTGGGTTGAGGCCTGGCCCAAAATACCGTGAATTGCAACTT
GGGAATTCAGTACAGTCGGATCGCCAAGATATCATGGTTCATCCCAGTGATGTATTGGGG
CCGTCTGTTCCTGGTCCTATTGTACTCGTTGTTGACTGCCCAACACCATCTCATCTGCAA
GAATTGTCGTCTATACATTCTCTTACTCCATATTATTCATATCCATCCGAAGAATCCAAG
GAAATGTGCAAAAAAGTTGATTGTGTGATACACCTTAGTTCTGCTTCAGTAACATGTTCA
ACTGAATATCAGCAATGGATGTCAAGATTTGGTGAGGCGCAGCACATCATGGCAGGACAT
CAGCCGAAGAATATTGAAATTCCAATTCTGAAGTCGAGTGCAAGAATCGCCTCAAGACTG
AATTATTTGTGCCCTCAATTCTTTCCTGCCCCTGGTTTTTGGTCCCTTCCGCAGTTGAAG
AGCTTACCCTCAGTCTCTAAGACCCCAAGTGAGTTCTCTTCATGTCAAGTTACGGCAGAG
AACCTCCTCAAGTTTCATCTTCGTCCATATGCGCAGCTTGGGTTAGACAGATCTGGTATT
CCTGAAATTACTTCTCGTCCAAAAATCATAGAAGAGTTAATATCAGAAATTCCTGAAATA
TTAGATGCTTCTGAACATATTACCCAGATGTTGCATGGCAACAATGTTACAAATGGAGGC
AGTGCGACTATGCAGGCGAACAAAGTTATGATCGAAGAGCCCTGGTTGCATGAAACTGCA
TTACCTAGTTGTTTGGAAGGTGTAACAAGAGAAGACGTGGAGATTGTTCTTCTTGGAACT
GGTTCATCTCAGCCTTCAAAATATCGGAATGTTAGTTCTATTTTTGTCAATCTTTTCTCA
AAGGGAAGTATTCTGTTAGATTGTGGTGAAGGAACATTGGGACAGCTCAAAAGAAGATTT
GGCATTGAAGGTGCTGATGAAGCCGTAAAAGATTTAAGGTGTATTTGGATTTCTCATATT
CATGCTGATCATCATACTGGTCTTGCAAGAATACTTGCTCTCCGACGCGATTTGCTCAAT
GAAACTCCTCATGAACCTTTAATTGTTGTGGGCCCAAGGCAGCTTAAGAGATTCCTCGAT
GCATACCAAAAACTCGAGGATCTGGATATGCAGTTCCTTGATTGTAGGCATACTACAGAA
GCTTCATTAAAGACTTTCGAGTCAAATGAAGATAAGGATGTGAGTGAGAGTGCATGTGTA
CCAAGTGACCAAAAGAATGGTTCTACCTTATTTGCTAAAGGGAGCCGTATGGAGAGTTAT
TGGAAGAGGCCAGGCAGTCCGGTTGATTCAGCGGCTGTATTCCCATTGCTGAAGACATTA
AAGGAAATTCTCAGAGACGCAGGATTGGAGGCATTGATTAGCTTTCCTGTTATTCATTGT
CCACAAGCATATGGCGCTGTCTTGAAGGCTGCTGATAGGACTAATAGCACTGGGAAGAAG
ATACCAGGATGGAAAATTGTATACTCTGGCGACACTAGGCCGTGTCCAGAACTAGTTGAA
GCTTCGCGTGGTGCAACGGTTCTCATACACGAGGCTACCTTTGAAGATGGCATGGTGGAG
GAAGCCATAGCAAGAAATCATAGCACAACACAGGAAGCCATCGAAGTAGGGGACTCTGCT
GGAGCATATCGTATCATCCTCACTCACTTCAGTCAAAGATACCCTAAAATTCCAGTTTTT
GATGAAACACACATGCACAAAACATGCATTGCTTTTGATATGATGAGTGTTAACTTAGCA
GACCTACCCATGCTTCCAAGAGTTCTTCCATATCTTAAACTGCTATTTCGTGATGAAATG
ATAGCTGATGATATCGATGTTGCTACAGTAGCTATTTGA

Peptide Sequence

PEP ID

XP_016440207.1
PEP Infomation

PREDICTED: zinc phosphodiesterase ELAC protein 2-like isoform X4 [Nicotiana tabacum]
Sequence

MGEEGMSVNLWGPSDLKYLVDAMKSFIPNAAMVHARSFGPTVGSVDVSTASSGTSDDLYV
PINDEVVKISAVLLRPRYSKVSDTTKEGSSELDDPLVGVNHLAENLLVRRMHSTAEFALK
PGDLSVVYICELPEIKGKFDPKKAAALGLRPGPKYRELQLGNSVQSDRQDIMVHPSDVLG
PSVPGPIVLVVDCPTPSHLQELSSIHSLTPYYSYPSEESKEMCKKVDCVIHLSSASVTCS
TEYQQWMSRFGEAQHIMAGHQPKNIEIPILKSSARIASRLNYLCPQFFPAPGFWSLPQLK
SLPSVSKTPSEFSSCQVTAENLLKFHLRPYAQLGLDRSGIPEITSRPKIIEELISEIPEI
LDASEHITQMLHGNNVTNGGSATMQANKVMIEEPWLHETALPSCLEGVTREDVEIVLLGT
GSSQPSKYRNVSSIFVNLFSKGSILLDCGEGTLGQLKRRFGIEGADEAVKDLRCIWISHI
HADHHTGLARILALRRDLLNETPHEPLIVVGPRQLKRFLDAYQKLEDLDMQFLDCRHTTE
ASLKTFESNEDKDVSESACVPSDQKNGSTLFAKGSRMESYWKRPGSPVDSAAVFPLLKTL
KEILRDAGLEALISFPVIHCPQAYGAVLKAADRTNSTGKKIPGWKIVYSGDTRPCPELVE
ASRGATVLIHEATFEDGMVEEAIARNHSTTQEAIEVGDSAGAYRIILTHFSQRYPKIPVF
DETHMHKTCIAFDMMSVNLADLPMLPRVLPYLKLLFRDEMIADDIDVATVAI

Transcript Sequence

Gene sequence data has not been registered.